methylc-seq data Search Results


infinium hm450 beadchip  (INFINIUM Inc)
90
INFINIUM Inc infinium hm450 beadchip
The fraction of fragments captured by MethylCap-seq (solid lines) are plotted as a function of <t>HM450</t> methylation degrees (beta-values, binned per 1%), for both types of HM450 assays: type 1 (blue), type 2 (orange), and combined (black). The beta-value distributions are depicted as dashed lines for both types individually (type 1, blue; type 2, orange) and combined (black).
Infinium Hm450 Beadchip, supplied by INFINIUM Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/methylc-seq+data/pmc04612737-130-6-5?v=INFINIUM+Inc
Average 90 stars, based on 1 article reviews
infinium hm450 beadchip - by Bioz Stars, 2026-07
90/100 stars
  Buy from Supplier
methylcap-seq  (INFINIUM Inc)
90
INFINIUM Inc methylcap-seq
The fraction of fragments captured by MethylCap-seq (solid lines) are plotted as a function of <t>HM450</t> methylation degrees (beta-values, binned per 1%), for both types of HM450 assays: type 1 (blue), type 2 (orange), and combined (black). The beta-value distributions are depicted as dashed lines for both types individually (type 1, blue; type 2, orange) and combined (black).
Methylcap Seq, supplied by INFINIUM Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/methylc-seq+data/pmc05348351-117-5-15?v=INFINIUM+Inc
Average 90 stars, based on 1 article reviews
methylcap-seq - by Bioz Stars, 2026-07
90/100 stars
  Buy from Supplier
c57bl/6n  (HFK Bioscience)
90
HFK Bioscience c57bl/6n
The fraction of fragments captured by MethylCap-seq (solid lines) are plotted as a function of <t>HM450</t> methylation degrees (beta-values, binned per 1%), for both types of HM450 assays: type 1 (blue), type 2 (orange), and combined (black). The beta-value distributions are depicted as dashed lines for both types individually (type 1, blue; type 2, orange) and combined (black).
C57bl/6n, supplied by HFK Bioscience, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/methylc-seq+data/pm33484631-543-198-226?v=HFK+Bioscience
Average 90 stars, based on 1 article reviews
c57bl/6n - by Bioz Stars, 2026-07
90/100 stars
  Buy from Supplier

Image Search Results


The fraction of fragments captured by MethylCap-seq (solid lines) are plotted as a function of HM450 methylation degrees (beta-values, binned per 1%), for both types of HM450 assays: type 1 (blue), type 2 (orange), and combined (black). The beta-value distributions are depicted as dashed lines for both types individually (type 1, blue; type 2, orange) and combined (black).

Journal: Scientific Reports

Article Title: Genome-wide DNA methylation detection by MethylCap-seq and Infinium HumanMethylation450 BeadChips: an independent large-scale comparison

doi: 10.1038/srep15375

Figure Lengend Snippet: The fraction of fragments captured by MethylCap-seq (solid lines) are plotted as a function of HM450 methylation degrees (beta-values, binned per 1%), for both types of HM450 assays: type 1 (blue), type 2 (orange), and combined (black). The beta-value distributions are depicted as dashed lines for both types individually (type 1, blue; type 2, orange) and combined (black).

Article Snippet: In this manuscript, MethylCap-seq and Infinium HM450 BeadChip data were compared for a large set of 70 brain tissue samples, mostly glioblastoma.

Techniques: Methylation

The average RRBS methylation degree is plotted as a function of methylation degrees (beta-values, binned per 5%) for both types of HM450 assays: type 1 (blue) and type 2 (orange), and combined (black). The green line reflects unbiased concordance between both methods (theoretical).

Journal: Scientific Reports

Article Title: Genome-wide DNA methylation detection by MethylCap-seq and Infinium HumanMethylation450 BeadChips: an independent large-scale comparison

doi: 10.1038/srep15375

Figure Lengend Snippet: The average RRBS methylation degree is plotted as a function of methylation degrees (beta-values, binned per 5%) for both types of HM450 assays: type 1 (blue) and type 2 (orange), and combined (black). The green line reflects unbiased concordance between both methods (theoretical).

Article Snippet: In this manuscript, MethylCap-seq and Infinium HM450 BeadChip data were compared for a large set of 70 brain tissue samples, mostly glioblastoma.

Techniques: Methylation

Gold standard independent DNA-methylation prevalence estimation, and sensitivity and specificity estimation for HM450 and MethylCap-seq.

Journal: Scientific Reports

Article Title: Genome-wide DNA methylation detection by MethylCap-seq and Infinium HumanMethylation450 BeadChips: an independent large-scale comparison

doi: 10.1038/srep15375

Figure Lengend Snippet: Gold standard independent DNA-methylation prevalence estimation, and sensitivity and specificity estimation for HM450 and MethylCap-seq.

Article Snippet: In this manuscript, MethylCap-seq and Infinium HM450 BeadChip data were compared for a large set of 70 brain tissue samples, mostly glioblastoma.

Techniques:

Conditional sensitivity (squares) and specificity (triangles) are plotted as a function of sequencing depth, for both HM450 type 1 (blue) and type 2 (orange) assay types. Loess regression curves (using span smoothing parameter 0.95) have been added for both sensitivity (solid lines) and specificity (dashed lines) for both HM450 assay types.

Journal: Scientific Reports

Article Title: Genome-wide DNA methylation detection by MethylCap-seq and Infinium HumanMethylation450 BeadChips: an independent large-scale comparison

doi: 10.1038/srep15375

Figure Lengend Snippet: Conditional sensitivity (squares) and specificity (triangles) are plotted as a function of sequencing depth, for both HM450 type 1 (blue) and type 2 (orange) assay types. Loess regression curves (using span smoothing parameter 0.95) have been added for both sensitivity (solid lines) and specificity (dashed lines) for both HM450 assay types.

Article Snippet: In this manuscript, MethylCap-seq and Infinium HM450 BeadChip data were compared for a large set of 70 brain tissue samples, mostly glioblastoma.

Techniques: Sequencing

Fractions of loci corresponding to CpG-islands, shores, shelves and open sea and fractions of promoter, exon, intron, pseudogene and intergenic loci assessed by HM450 ( A,B ) and detected by MethylCap-seq ( C,D ) and their genome-wide distribution ( E,F ).

Journal: Scientific Reports

Article Title: Genome-wide DNA methylation detection by MethylCap-seq and Infinium HumanMethylation450 BeadChips: an independent large-scale comparison

doi: 10.1038/srep15375

Figure Lengend Snippet: Fractions of loci corresponding to CpG-islands, shores, shelves and open sea and fractions of promoter, exon, intron, pseudogene and intergenic loci assessed by HM450 ( A,B ) and detected by MethylCap-seq ( C,D ) and their genome-wide distribution ( E,F ).

Article Snippet: In this manuscript, MethylCap-seq and Infinium HM450 BeadChip data were compared for a large set of 70 brain tissue samples, mostly glioblastoma.

Techniques: Genome Wide

Comparison of the numbers of methylated loci, stratified by functional annotation, between HM450 and MethylCap-seq.

Journal: Scientific Reports

Article Title: Genome-wide DNA methylation detection by MethylCap-seq and Infinium HumanMethylation450 BeadChips: an independent large-scale comparison

doi: 10.1038/srep15375

Figure Lengend Snippet: Comparison of the numbers of methylated loci, stratified by functional annotation, between HM450 and MethylCap-seq.

Article Snippet: In this manuscript, MethylCap-seq and Infinium HM450 BeadChip data were compared for a large set of 70 brain tissue samples, mostly glioblastoma.

Techniques: Methylation, Functional Assay